Browse of TCMCG007C56385 protein

CDS

Accession Number	TCMCG007C56385
gbkey	CDS
Protein Id	XP_009115601.1
Location	complement(join(31442790..31443122,31443204..31443296,31443388..31443606,31443725..31443793,31443878..31445608,31445703..31445853,31445926..31446163,31446238..31446293,31446370..31446632,31446714..31446856,31446955..31447009,31447089..31447160,31447228..31447320))
Gene	LOC103249166
GeneID	103249166
Organism	Brassica rapa

Protein

Length	1171aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009117353.3
Definition	protein GIGANTEA isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Gigantea-like
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG]
KEGG_ko	ko:K12124        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04712        [VIEW IN KEGG] map04712        [VIEW IN KEGG]
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000302        [VIEW IN EMBL-EBI] GO:0003006        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006355        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006979        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0007623        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009409        [VIEW IN EMBL-EBI] GO:0009416        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009636        [VIEW IN EMBL-EBI] GO:0009637        [VIEW IN EMBL-EBI] GO:0009639        [VIEW IN EMBL-EBI] GO:0009791        [VIEW IN EMBL-EBI] GO:0009889        [VIEW IN EMBL-EBI] GO:0009908        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0010218        [VIEW IN EMBL-EBI] GO:0010378        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0010556        [VIEW IN EMBL-EBI] GO:0019219        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0031323        [VIEW IN EMBL-EBI] GO:0031326        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042493        [VIEW IN EMBL-EBI] GO:0042542        [VIEW IN EMBL-EBI] GO:0042752        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046677        [VIEW IN EMBL-EBI] GO:0048367        [VIEW IN EMBL-EBI] GO:0048511        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048578        [VIEW IN EMBL-EBI] GO:0048580        [VIEW IN EMBL-EBI] GO:0048582        [VIEW IN EMBL-EBI] GO:0048583        [VIEW IN EMBL-EBI] GO:0048584        [VIEW IN EMBL-EBI] GO:0048586        [VIEW IN EMBL-EBI] GO:0048608        [VIEW IN EMBL-EBI] GO:0048731        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051094        [VIEW IN EMBL-EBI] GO:0051171        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0051240        [VIEW IN EMBL-EBI] GO:0051252        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0061458        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0080090        [VIEW IN EMBL-EBI] GO:0080167        [VIEW IN EMBL-EBI] GO:0090567        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1903506        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI] GO:2000028        [VIEW IN EMBL-EBI] GO:2000112        [VIEW IN EMBL-EBI] GO:2000241        [VIEW IN EMBL-EBI] GO:2000243        [VIEW IN EMBL-EBI] GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACATCGCCTACTTCATCTGAGAGGTGGACCGATGGTCTTCAGTTCTCTTCCTTGTTATGGTCTCCCCCACGTGACCCTCAACAACATAAGGATCAAGTCGTTGCTTATGTCGAATACTTTGGTCAGTTCACATCAGAGCAATTCCCTGATGATATTGCTGAGTTGGTCCGTAATCAGTATCCCTCAACTGAGAAGCGACTTTTGGATGATGTGTTGGCTATGTTTGTACTCCATCATCCTGAGCATGGTCATGCTGTCATCCTTCCGATTATCTCATGTCTCATCGATGGCACTCTAGTGTACAGCAAGGAAGCTCATCCCTTCGCCTCTTTCATTTCTTTAGTTTCCCCAAATAGTGAGAATGACTATTCAGAGCAATGGGCTTTGGCGTGCGGAGAAATCCTACGCATCTTGACTCATTACAACCGTCCCATTTACAAGACGGAGCAGCAAAATGGAGAAACGGAGAGCAAAGCTTCTACTAGTGGGTCTCCTACGCTTTCAGAGGCTAAGGCTGTATCACCAGGACAGCATGAAAGGAAACCGCTAAGGCCTTTGTCTCCATGGATCAGTGATATACTACTCGCTGCTCCCCTTGGTATTAGAAGTGACTACTTTCGTTGGTGTAGTGGTGTTATGGGTAAATATGCTGCTGGAGAGCTCAAGCCACCTACCATTGCTACTCGAGGATCTGGTAAACATCCTCAATATATGCCTTCGACACCAAGATGGGCGGTTGCTAATGGAGCTGGTGTCATACTGAGTGTTTGTGATGATGAAGTCGCTCGGTATGAGACTGCTACGTTAACAGCGGTTGCTGTCCCTGCACTTCTGCTTCCTCCCCCAACGACATCCTTAGATGAGCATTTAGTTGCTGGCCTTCCAGCTCTTGAGCCTTATGCACGTTTGTTTCACAGATATTATGCGATTGCAACTCCAAGTGCTACTCAGAGACTTCTTCTTGGACTCTTGGAAGCACCACCGTCGTGGGCTCCAGATGCACTTGATGCTGCCGTACAGCTTGTGGAGCTTCTCCGAGCTGCTGAAGATTATGCATCTGGTGTAAGGCTACCAAGGAACTGGATGCATTTGCACTTCTTGCGTGCAATAGGAATCGCCATGTCTATGAGGGCAGGCGTTGCTGCTGACGCTGCAGCTGCTTTACTTTTCCGCATACTGTCGCAGCCGGCACTGCTTTTTCCTCCGCTAAGCCAAGCTGAGGGAGTAGAAATCAAACACGCTCCTATTGGTGGCTACGGTTCAAATTACAGAAAGCAGATAGAAGTTCCTGCAGCAGAAGCAACCATTGAAGCCACTGCACAAGGAATAGCCTCAATGCTTTGTGCTCACGGACCTGAAGTGGAGTGGAGGATCTGCACTATATGGGAAGCTGCCTATGGATTGATCCCTTTAAACTCCTCAGCCGTTGATCTCCCTGAGATCATTGTCGCCACCCCACTGCAGCCTCCCATCTTGTCATGGAACCTATACATCCCACTCCTCAAAGTACTCGAGTATCTTCCACGTGGGAGTCCTTCCGAAGCATGCTTGATGAAGATATTCGTCGCCACGGTGGAAACAATCCTCAGCAGGACTTTCCCGCCAGAGACTTCTATCAGGAAAGCTAGAGCGAGTTTAGCCACGAGATCATCAGCGACCAAAAACCTAGCTATGGCTGAGCTTCGTGCTATGGTCCATGCTCTCTTCTTGGAATCATGCGCTGGCGTGGAGATAGCGTCGCGCCTGCTTTTCGTTGTGTTGACTGTGTGTGTTAGCCATGAAGCGCAGTCTAGTGGGAGCAAGAGACGGAGAAGCGAAGAAGATGCTACTGCAGAGGAGAATCAAGACAATCAAACTAGTAACCGTAAAAGTAGGAACGTCAAGGGACAAGGACCTGTGGCGGCGTTTGATTCGTACGTTCTCGCTGCTGTCTGTGCTCTCGCCTGTGAGGTTCAGCTGTATCCTATGATCTCCGGAGGAGGGAACTTCTCCAACTCTGCAGTGGCTGCAACCATTACAAAGTCTGTGAAGATAAACGGTTCATCTAACGAGTACGGAGCTGGGATTGACTCTGCAATCAAGCACACACGCCGCATCTTAGCGATTCTCGAGGCGCTCTTTTCGTTGAAGCCATCTTCTGTGGGGACTCCGTGGAGTTACAGCTCTAGCGAGATAGTTGCTGCGGCCATGGTCGCAGCTCACATCTCCGAACTGTTCAGACGCTCAAAGGCCTTGACGCATGCCTTGTCTGGTTTGATGAGATGCAAATGGGACAAGGAGATTCATAAGAGAGCGTCGTCTTTGTATAACCTCATCGATGTTCATAGCAAAGTTGTAGCATCCATCGTCGACAAAGCTGAACCCTTAGAAGCGTACCTTAAGAACGCCCCGGTCCAGAAGGATTCGCTGGCTTGTGTTAACTGGAAACAACAGAACAACACATCATCAGCAGCAGGGTTTGGTACAGCGGCGGTGACGTCCACGTCACGTAATGAAATGGCTCCGAGAGGAGGTAACCATAAGTATGCTAGGCATTCAGATGAAGGCTCAGGGAGTAGATCGTCATCAGATAAGGGCATCAAAGATCTGCTGTTGGATGCTTCTGATCTAGCGAATTTCCTCACGGCTGATAGGCTAGCAGGGTTTTACCGTGGTACGCAAGTTCTTTTGAGGTCGATACTTGCTGAGAAACCGGAGCTTTCTTTCTCCGTTGTTTCGCTGTTGTGGCACAAACTGATCGCTTCTCCTGAGATCCAGCCCACAGCCGAAAGCACCTCTGCTCAGCAAGGATGGAGACAGGTAGTTGATGCACTATGCAATGTGGTATCTGCAACGCCAGCAAAAGCAGCTGCAGCCGTTGTTCTTCAGGCTGAGAGAGAGTTGCAGCCTTGGATAGCCAAAGATGATGAAGAAGGTCAGAAAATGTGGAAAATAAACCAAAGGATAGTGAAAGTGATGGTGGAACTCATGAGGAATCATGACAGGCCTGAGTCACTGGTGATTCTGGCAAGTGCATCTGATCTCCTTCTGAGAGCAACTGATGGAATGCTTGTTGATGGAGAAGCTTGTACATTACCTCAACTTGAGCTACTTGAAGCTACAGCAAGAGCAATACAGCCAGTGTTAGCTTGGGGACCATCTGGACTAGCAGTAGTTGACGGCTTATCAAATCTATTGAAGTGTCGTCTGCCGGCAACAATACGGTGCCTCTCACACCCAAGTGCACACGTACGTGCCTTGAGCACATCAGTACTACGAGACATCATGAACCAAAGCGGCATAACCACCACCAAGGCAACTCCAAAACCGCCGCCAACAATAACAACCGAGAAGAACGGAACGGACAGCCCGTCGTACAGGTTCTTCAACGCGGCGGCAATAGACTGGAAAGCAGACATACAAAAGTGTTTGAACTGGGAAGCGCACAGCTTGCTGTCGACGACAATGCCGACACAGTTTCTTGACACGGCGGCTCGGGAATTAGGATGTACCATATCAATGTCGTCCCAATAA

Protein:   MTSPTSSERWTDGLQFSSLLWSPPRDPQQHKDQVVAYVEYFGQFTSEQFPDDIAELVRNQYPSTEKRLLDDVLAMFVLHHPEHGHAVILPIISCLIDGTLVYSKEAHPFASFISLVSPNSENDYSEQWALACGEILRILTHYNRPIYKTEQQNGETESKASTSGSPTLSEAKAVSPGQHERKPLRPLSPWISDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIATRGSGKHPQYMPSTPRWAVANGAGVILSVCDDEVARYETATLTAVAVPALLLPPPTTSLDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGVRLPRNWMHLHFLRAIGIAMSMRAGVAADAAAALLFRILSQPALLFPPLSQAEGVEIKHAPIGGYGSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVETILSRTFPPETSIRKARASLATRSSATKNLAMAELRAMVHALFLESCAGVEIASRLLFVVLTVCVSHEAQSSGSKRRRSEEDATAEENQDNQTSNRKSRNVKGQGPVAAFDSYVLAAVCALACEVQLYPMISGGGNFSNSAVAATITKSVKINGSSNEYGAGIDSAIKHTRRILAILEALFSLKPSSVGTPWSYSSSEIVAAAMVAAHISELFRRSKALTHALSGLMRCKWDKEIHKRASSLYNLIDVHSKVVASIVDKAEPLEAYLKNAPVQKDSLACVNWKQQNNTSSAAGFGTAAVTSTSRNEMAPRGGNHKYARHSDEGSGSRSSSDKGIKDLLLDASDLANFLTADRLAGFYRGTQVLLRSILAEKPELSFSVVSLLWHKLIASPEIQPTAESTSAQQGWRQVVDALCNVVSATPAKAAAAVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVMVELMRNHDRPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIMNQSGITTTKATPKPPPTITTEKNGTDSPSYRFFNAAAIDWKADIQKCLNWEAHSLLSTTMPTQFLDTAARELGCTISMSSQ